Genome Assembly Tools and Software - PART1 !!
...described in the Genome Biology manuscript. misFin...– A Workflow Management System for de novo Genome Assembly...verlap-Layout-Consensus (OLC) approaches. MaSuRCA can assemble data...rogram) is a de novo assembly approach and its implementation based...2698 days ago
Perl Special Vars Quick Reference
$_ The default or implicit variable. @_ Subroutine parameters. $a$b sort&...orting $? Child error. Status code of most recent system call or pipe. $! Operating System E...2656 days ago
Awesome perl frameworks, libraries and software - PART 1
A curated list of awesome Perl frameworks, libraries and software....ree, open source, lightweight system monitoring tool. vsespb/mt-a...and Apache module. perl6/ecosystem - Perl 6 ecosystem -- mo...pen source content management system and web application framework...2501 days ago
2501 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
analog -- A feature that appears similar in two taxa which have origin...ment of organisms in hierarchical system that ideally reflects evoluti...best. phylogenetics -- Field of biology that deals with the relations...h gene order is conserved. systematics -- Field of biology...2474 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
kallisto Transcript abundance quanti...g the Overlap-Layout Consensus (OLC) approach without the necessity of an...r abundances (uses composition-based approach and non-negative least square...ds Software (Python) http://jordan.biology.gatech.edu/page/software/strin...2383 days ago
Bioinformatics Web Application Development with Perl
Perl's second wave of adoption came from the growth of the world w...rl's ubiquity as a language for system administrators and its power...work is a flexible and powerful system for building small to large w...ar, its plugin and extension ecosystem...directory and hoping that your system a...2333 days ago
2317 days ago
List of visualization tools for network biology
Network analysis is any structured technique used to mathematically...simulation software http://magnet.systemsbiology.net/software/Dizzy/ DyCoNet...oration for any network and complex system, dynamic and hierarchical grap...files) into standardized diagrams (Systems Biology...2300 days ago
Linux Commands Cheat Sheet for Bioinformatics and Computational Biology Professionals
The purpose of this cheat sheet is to introduce biologist and bioinformaticia...xperience in writing one-liners. File System ls — list items in...;— create an alias for a command System...dash; find all instances of file in real system l...2292 days ago