RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
The RAST (Rapid Annotation using Subsystem Technology) annotation engine was built in 2008 to annotate bacterial and archaeal genomes. It works by offering a standard software pipeline...2929 days ago
2862 days ago
VirtualFlow: a versatile, parallel workflow platform for carrying out virtual screening
...erent types of tasks: VFLP: VirtualFlow for Ligand Preparation VFVS : VirtualFlow for Virtual Screenings They use the same core technology regarding the workflow manage...1421 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
...bout Strand Life Sciences Strand Life Sciences is a premier life science informatics innovation company. Founded in 2000, Strand is a leader in technology innovations for healthcare us...2386 days ago
SIMBA: a web tool for managing bacterial genome assembly generated by Ion PGM sequencing technology
SIMBA, SImple Manager for Bacterial Assemblies, is a Web interface for managing assembly projects of bacterial genomes. SIMBA was created to assist bioinformaticians to a...2539 days ago
Web Apollo: a web-based genomic annotation editing platform
...ous, collaborative genomic annotation editor available on the web. One of the natural consequences following from current advances in sequencing technology is that there are more and mo...2473 days ago
poRe: an R package for the visualization and analysis of nanopore sequencing data
Motivation: The Oxford Nanopore MinION device represents a unique sequencing technology. As a mobile sequencing device powered by the USB port of a laptop, the MinION has huge pote...2354 days ago
IONiseR: tools for the quality assessment of data produced by Oxford Nanopore’s MinION sequencer
...ots for examining the statistics that we think will be useful for this task. However, nanopore sequencing is an emerging and rapidly developing technology. It is not clear what will be...2354 days ago
2349 days ago
NanoSim: nanopore sequence read simulator based on statistical characterization.
NanoSim, a fast and scalable read simulator that captures the technology-specific features of ONT data and allows for adjustments upon improvement of nanopore sequencing technology. The first step of NanoSim is...2330 days ago