2499 days ago
Mesquite: A modular system for evolutionary analysis
Mesquite is modular, extendible software for evolutionary biolo...about organisms. Its emphasis is on phylogenetic analysis, but some of its modules conc...cs, while others do non-phylogenetic multivariate analysis. Because it is modular, the a...2495 days ago
Sequence - Evolution - Function; Computational Approaches in Comparative Genomics
Sequence - Evolution - Function is an introduction to the computational approaches th...ntial and limitations of computational and experimental approaches to genome analysis.2476 days ago
Taxoblast : Taxoblast is a pipeline to identify contamination in genomic sequence
Modern genome sequencing strategies are highly se...DNA sequences an important part of analysis pipelines. Here we use Taxobl...sequences. This or similar types of analysis, in combination with manual c...ic data to public repositories. Our analysis pipeline is open-source and f...2367 days ago
poRe: an R package for the visualization and analysis of nanopore sequencing data
Motivation: The Oxford Nanopore MinION device represents a unique sequencing technology. As a mobile sequencing device powered by the USB port of a laptop, the MinI...2367 days ago
DRAWID: user-friendly Java software for chromosome measurements and idiogram drawing
"DRAWID has number of advantages including a user-friendly interactive interface, possibil...well as number of useful functions facilitating the procedure of chromosome analysis," explain the scientists. "T...2363 days ago
Computational Genomics: Applied Comparative Genomics
The primary goal of the course is for students to be grounded in theory and...mbly & comparative genomics, variant identification & analysis, gene expression & regulation, personal genome analysis, and cancer genomics. The gra...2361 days ago
Scripts for the analysis of HGT in genome sequence data.
Scripts for the analysis of HGT in genome sequence data2361 days ago
ACANA: An accurate and consistent alignment tool for DNA sequences
ACANA is an accurate and consistent alignment tool for DNA sequences. ACANA is specificall...ccurate alignment tool, ACANA is particularly useful in comparative sequence analysis for identifying conserved fun...2354 days ago
Harvest: a suite of core-genome alignment and visualization tools
Harvest is a suite of core-genome alignment and visualization tools for quickly analyzing...and phylogenetic trees. Tools Parsnp - Core-genome alignment and analysis Gingr - Interactive vis...2352 days ago