Awesome bioinformatics pipelines !
A curated list of awesome pipeline toolkits ... https://github.com/pditommaso/awesome-pipeline2967 days ago
QUAST: quality assessment tool for genome assemblies
QUAST evaluates genome assemblies. For metagenomes, please see MetaQU...mparison. More at http://bioinf.spbau.ru/quast http://bioinformatics.oxfordjournals.org/content/early/2013/03/09/bioinformatics.btt086.long2960 days ago
2952 days ago
RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
The RAST (Rapid Annotation using Subsystem Technology) annotation engine was built in 20...ake RAST a more useful research tool and to keep pace with advancements in bioinformatics, it has become desirable to b...2939 days ago
SATSUMA : Highly sensitive whole-genome synteny alignments.
Satsuma is a whole-genome synteny alignment program. It takes two genomes, computes alig...Genome-wide synteny through highly sensitive sequence alignment: Satsuma. Bioinformatics, 26(9), 1145-51. Tutorial at...2924 days ago
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Bpipe - a tool for running and managing bioinformatics pipelines
Bpipe provides a platform for running big bioinformatics jobs that consist of a series of process...le Group) Bpipe has been published in Bioinformatics! If you use Bpipe, please cit..., Bpipe: A Tool for Running and Managing Bioinformatics Pipelines, Bioinformatics2915 days ago
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CNIDARIA: fast, reference-free phylogenomic clustering
Motivation: Identification of biological specimens is a major requirement for a range of...@gmail.com Supplementary information: Supplementary data are available at Bioinformatics online.2889 days ago