1543 days ago
netGO: R-Shiny package for network-integrated pathway enrichment analysis
netGO is an R/Shiny package for network-integrated pathway enrichment analysis.netGO provides user-interactive visualization of enrichment analysis results and related...1538 days ago
LoFreq*: A sequence-quality aware, ultra-sensitive variant caller for NGS data
...her methods or only used for filtering. https://github.com/CSB5/lofreq http://csb5.github.io/lofreq/installation/ https://github.com/CSB5/lofreq/tree/master/dist1532 days ago
IRscope: an online program to visualize the junction sites of chloroplast genomes
eMPRess, a software program for phylogenetic tree reconciliation under the duplication-transfer-loss model that systematically addresses the problems of choosing event costs and selecting representative solutions, enabling users to make more robust inferences.1251 days ago
963 days ago
PaReBrick: PArallel REarrangements and BReaks identification toolkit
...represented as a sequence of oriented synteny blocks and a phylogenetic tree as input data. It identifies rearrangements, tests them for consistency with a tree, and sorts the events by thei...934 days ago
929 days ago
VCF2PopTree: a client-side software to construct population phylogeny from genome-wide SNPs
VCF2PopTree is a client-side software written in...squo;s computer/browser. VCF2PopTree is compatible with all popula.... Furthermore, it displays the tree in a mobile phone (iPhone and...U. and Chen, D. (2019). VCF2PopTree: a client-side software to co...856 days ago
840 days ago
Genomicus: genome browser that enables users to navigate in genomes in several dimensions
...All the data on extant species displayed in this browser are from Ensembl. Summary statistics of Genomicus version 105.01: (view species tree in pdf or newi...790 days ago