Results for "Tree Approach"
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Nucl2Vec: Local alignment of DNA sequences using Distributed Vector Representation
We demonstrate a novel approach forlocal alignment of DNA reads with respect to reference genome.For th...ncoding(Nucl2Vec) and k-nearest neighbor for the alignment.With our new approach we have reduced computation c...1160 days ago
Public Databases for Bioinformatics !
https://www.nature.com/articles/s41467-020-17155-yServer Infrastructure: File Server: dhara: Synology 3614...f narrowPeak files summarized in https://github.com/wkopp/janggu_usecases/tree/mas...1153 days ago
Junk part of the human genome unlocked
More: Texas A&M Biologists Unlock Non-Coding Half of Human Genome with Novel D...not stagnant as researchers originally had believed " Simple Quantitative PCR Approach to Reveal Naturally Occurring...3510 days ago
- Chromosome number is a remarkably dynamic feature of eukaryotic evolution. Chromosome numbers can change by a dup...the set of ancestral chromosome numbers, and estimates the location along the tree for...
3402 days ago
Assembly and diploid architecture of an individual human genome via single-molecule technologies
The research work shows that it is now possible to integrate single-molecule and high-throughput sequence data to generate de novo assembled genomes that approach reference quality. https://w...3234 days ago
- HapSolo, that identifies secondary contigs and defines a primary assembly based on multiple pairwise contig alignment metrics. HapSolo evaluates candidate primary assemb...
1106 days ago
- MetaPred2CS Web server is a meta-predictor based on Support Vector Machine (SVM) that combines 6 i...co-evolutionary methods: in-silico two hybrid (i2h) and mirror tree (MT...
2634 days ago
Alignment of closely related whole genomes/scaffolds
With the relative ease and low cost of current generation sequencing technologies has led to a dramatic increase in the number of sequenced genomes for species across the tree of...3033 days ago
Ensembl comparative genomics resources
The Ensembl comparative genomics resources are one such reference set that facilitat...ts are used to define Ensembl Protein Families, GeneTrees and homologies for both prot...ilable including synteny displays, collapsible gene tree plo...3002 days ago
- Microbiome analysis using a single application MEGAN6 is a comprehensive toolbox for interactively analyzing mic...ysis using InterPro2GO, SEED, eggNOG or KEGG Bar charts, word clouds, Voronoi tree map...
2855 days ago
