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• • Martin Jones@martin

  

  NCBI Updated Tree Viewer http://www.ncbi.nlm.nih.gov/tools/treeviewer/ #NCBI #Viewer #Tree #Updates

  3273 days ago

• • Jitendra Narayan@admin

  

  Online Newick Tree Viewer http://etetoolkit.org/treeview/ #Tree #Newick #Onine #ETE #Phylogenetic

  3230 days ago

• • Jitendra Narayan@admin

  

  Statistics for biologist http://www.nature.com/collections/qghhqm/pointsofsignificance #Statistics #Biology #View #Method

  3197 days ago

• • Rahul Nayak@rahul

  

  #Scaffolder #evaluation with #Python #scripts https://github.com/martinghunt/Scaffolder-evaluation/tree/master/Analysis-scripts

  3009 days ago

• • Jit@jit.aber

  

  #Mapping #sequencing #reads to a #reference #genome with #Bowtie2: a step-by-step guide https://insidedna.me/tutorials/view/how-to-use-bowtie2-read-mapping

  2975 days ago

• • Surabhi Chaudhary@surabhi

  

  #BAM file to fasta #conversion with #Samtool: samtools view filename.bam | \ awk '{OFS="\t"; print ">"$1"\n"$10}' - > filename.fasta

  2965 days ago

• • Surabhi Chaudhary@surabhi

  

  #BAM file to #fastaq #conversion with #Samtool: samtools view filename.bam | awk '{OFS="\t"; print "@"$1"\n"$10"\n+\n"$11}' >| filename.fastq

  2965 days ago

• • Rahul Nayak@rahul

  

  Fast utilities https://github.com/jimhester/fasta_utilities/tree/master/scripts #Scripts

  2947 days ago

• • Poonam Mahapatra@poonam

  

  #Extract all #Reads from #BAM file for a #region Chr10:18000-45500 using #samtools: samtools view input.bam "Chr10:18000-45500" > output.bam

  2872 days ago

• • Shruti Paniwala@shruti

  

  #Extract #tabbed info from #BAM file with samtools: samtools view test.bam|awk '{print $1 "\t" $2 "\t" $3 "\t" $4 "\t" $4+length($10)-1}' > file.xls

  2873 days ago

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