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  • maftools

    ...nd used to store somatic variants detected. The Cancer Genome Atlas Project has sequenced over 30 different cancers with sample size of each cancer type being over 200. Resulting dat...

    890 days ago

  • JASMINE: Jointly Accurate Sv Merging with Intersample Network Edges

    ...tructural variants (SVs) across samples. Each sample has a number of SV calls, consisting of position information (chromosome, start, end, length), type and strand information, and a...

    693 days ago

  • Elastic BLAST !

    .... ElasticBLAST also selects the instance (i.e., machine) type for you based on database size. Of course, you can also choose the instance type manually if you prefer. 

    627 days ago

  • Upset plots !

    Upset plots are a type of visualization used to analyze the intersection of sets or categories. They are particularly useful for displaying data with multiple categories and an...

    427 days ago

  • gget

    gget is a free, open-source command-line tool and Python package that enables efficient querying of genomic databases. gget consists of a collection of separate but interoperable modules, each designed to facilitate one type of database querying in a single line of code.

    420 days ago