Results for "Viterbi Algorithm"
Blogs
Computer simulation of genetic mechanism !!
Computer simulation is the discipline of designing a model of an actual or theor...bc/ BEERS BEERS was designed to benchmark RNA-Seq alignment algorithms and also algorithms that aim to reconstruct diff...2969 days ago
Tools and Method for Haplotype phasing !
Huge amounts of genotype data are being produced with rec.../~junliu/plem/ “Read-backed phasing” algorithm: http://www.broadinstitute.org/gsa/wiki/index.php/Read-backed_phasing_algorithm SHAPE-IT: http://www.gr...1332 days ago
Structural variation: the hidden genomic treasure
Genome re-sequencing projects have revealed substantial amounts of genetic variation...otyping from depth of read mapping.2011a,2011b AGEa tools that implements an algorithm for optimal alignment of sequ...2696 days ago
Software and Tools to detect structure variation with long reads !!
Uncovering the connection between genetics and heritable diseases requires an approac...iant when you can have a parliament of tools deciding? Publication about the algorithm and “…the first...2601 days ago
- ...;Thanks to the improvement of algorithms and of better sequencing and...g graph theory. We develop an algorithm that identifies a most parsim...ements and extend a suggested algorithmic approach by Behzadi and Vin...implements several alignment algorithms, an indel maximum likelihood...
2524 days ago
String graph based genome assembly software and tools !
In graph theory, a string graph is an ...nbsp;and Richard Durbin. iii) Simpson-Durbin algorithm is that it does not rely on d...sembly pipeline. SGA implements a set of assembly algorithms based on the FM-index. As th...2322 days ago
List of motif discovery tools !
In genetics, a sequence motif is a nucleotide or amino-acid sequence pattern that i...T-REKS -- identification of Tandem REpeats in sequences with a K-meanS based algorithm Find information about tande...1987 days ago
Bioinformatics tools for telomere to telomere assembly !
● Merfin – k-mer-based assembly and varia...accuracy (Arang Rhie)● PanGenie – algorithm that leverages a pangenome re...sp;tama (Transcriptome Annotation by Modular Algorithms) – software designed f...985 days ago
Useful Bioinformatics Analysis Tools !
CoMeta Classificier of reads from metagenomic sequencing experiments. • &...A., Deorowicz, S., QuickProbs – A Fast Multiple Sequence Alignment Algorithm Designed for Graphics Process...857 days ago
Common methods to discover tandem repeats
Tandem repeats are DNA sequences that are repeated in a contiguou...be used on both nucleotide and protein sequences. The tool uses a statistical algorithm to identify repeats based on...417 days ago
