Results for "WA"
Users
Interests: GWAS26 days ago
- Interests: Pathway Analysis
3933 days ago
- +76 more Users
Blogs
Five unique traits of effective computational biologist
...earch is driven by large set of software, scripts, and tools to anal...lt and understand your discovery. Always remember you are a research...of computers, writing codes. They always think their job is to produ...t mediocre levels because something was not a good fit, such as they...3966 days ago
How to install Perl modules manually, using CPAN command, and other quick ways
...urces]Directory where the build process takes place? [/root/.cpan/build]Always commit changes to config va...stalls Bundle::BioPerl with all the dependent Perl modules. Quick Ways Oh, look at your face.....3965 days ago
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Bookmarks
List of popular bioinformatics software/tools
In current genome era, our day to day work is to handle the huge geneome sequences, expression data, several other datasets. This link provide a comprehensive list of commonly used sofware/tools.3961 days ago
- Bioinformatics is developing very rapidly. With new tools and software it is, now a days, easy to analyse...scale genomics datasets. But we need to understand the background of software/tool to better explain the...
3960 days ago
- +454 more Bookmarks
Files
- In an attempt to find a good Linux reference for bioinformatician and BOL readers, I was unsuccessful at finding a decent one on the Internet. So, we decided to make a cheat sheet for biological programmers.
3968 days ago
Bioinformatics approach to Boar Taint
...oar taint. Metabolism of androstenone and sex steroids share a common pathway which makes removal of boar...7 with the aid of FreeBayes , a variant caller tool. A final list of SNPs was prepared after filtering SNP...3805 days ago
- +12 more Files
Discussion topics
Which are the best statistical programming languages to study for a bioinformatician?
...Bio-informatics based genome sequencing and predicting metabolic pathways research jobs I u...and several Bioconductor packages. Matlab had a lot of powerful tools and was easy to use, whereas SPSS is...3967 days ago
Want to Know which genome assembler rule the world ?
Assemblathon 2: evaluating de novo methods of genome assembly http://www.gigasciencejournal.com/content/2/1/10/abstract http://blogs.nature.com/news/2013/07/g...3935 days ago
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Pages
Bio++ : C Language libraries for your biological need
C has always been a language that never...l expressions can be coded. C was widely distributed with an O...amework (that of C). When C++ was created, one of the initial...an extensible object-oriented way, in the C++ language. Some...rious population genetics software.Specific containers for pol...3963 days ago
- Ruby was created by Yukihiro Matsumoto, who wished to create...s. Ruby originated in Japan during the mid-1990s and was initially developed and designed by Yukihiro "Matz" Matsumoto. It was influenced primarily by Perl...
3963 days ago
- +28 more Pages
Top-level pages
- ..."The use of computers, laboratory robots and software to create, manage and inter...nomy trees, relationship data from metabolic pathways, the text of scientific pap...somerase. Currently, work on ontologies is under way to explicitly define a vocab...
3963 days ago
- The completion of the first human genome drafts was just a start of the modern DN...ted in further invention, improved development toward new advanced strategies of...ced bioinformatics tools. In oder to develope sotware/tools bioinformatician/ bio...
3963 days ago
- +85 more Top-level pages
Wire posts
News
- ...egularly by members from the R community: useR! - providing a forum to the R user community - and DSC - a platform for developers of statistical software. Recently useR! conference...
3967 days ago
- Google provide free class for people with a little bit of programming experience who want to learn Python. The google python class includes written materials, lecture videos, and lo...
3967 days ago
- +97 more News
Opportunity posts
- ...Research Training Group GRK 1907 “Role-based Software Infrastructures for continu...h-quality research on the connection between software engineering, database syste...equired. Applicants with a good knowledge of software engineering or one of the a...
3963 days ago
Research Project Posts for CSIR Project, Delhi
...ne who fulfills the eligibility criteria mentioned below may appear for a walk-in interview on 3rd September 2013 at CSIR Headquarters, Anusandhan Bhawan, 2 Rafi Marg, Delhi – 110001...3920 days ago
- +318 more Opportunity posts
ResearchLabs posts
Donnelly Centre of Cellular & Biomolecular Research (CCBR), Bader Lab
...e rewired by mutations to cause disease. This work is supported through the development of open-source biological pathway and network databases and visualization and analysis software. Predicting biologically r...3963 days ago
- ...for developing Chemgenome, Bhageerath & Sanjeevini methods & softwares for genome annotation, pro...tics & Computational Biology at IIT Delhi, and (c) for making the hardware and software freely accessi...
3963 days ago
- +45 more ResearchLabs posts
Fun
Bioinformatician become producer/director !!!
...k khoj Munna Bhai Promoter Gene se Genome tak. Maine BLAST kiya. NCBI wale Data le jayenge Raju...ustalW Kiya Hai GeneScan Karke Dekho Alignment Apna Sequence Parayi *Warning: It contain hindi words.3934 days ago
Perl Poem: Parse it in both Perl and English!
...do not, I-beg-you, close them, yet. accept (yourself, changes),bind (grief, despair); require truth, goodness if-you-will, each moment; select (always), length(of-days) # listen...3934 days ago
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Video
Personalised Medicine - Animation
Two animated case scenarios set now and in the future. These highlight potential differences in the way patients are treated now, and how they might be treated as healthcare becomes more tailored.3919 days ago
University of life sciences UMB - Campus Ås, Norway
Universitetet for miljø- og biovitenskap på Ås3933 days ago
- +42 more Video
Bio-Scripts
- #!/usr/bin/perl use strict; use warnings; #assign strings to variables my $DNA = "GATTACACAT"; my $polyA = "AAAA"; #concatenate two strings my $modifiedDNA = $DNA.$polyA;...
2932 days ago
Count the frequency of base G in a given DNA sequence
#!/usr/bin/perl use strict; use warnings; my $DNA = "GATTACACAT"; #initialize $countG and $currentPos my $countG = 0; my $currentPos = 0; #calculate the length of $DNA...2932 days ago
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Polls
Which of the following programming language is best for a bioinformatics beginner?
...in the course of my research work and I will like to learn a programming language which is compatible with most bioinformatics tools or software. I basically want to do de-novo assembly, map...3546 days ago
At what age did you gain passion in Bioinformatics?
Most of the bioinformatician were biologist ( yeah ... not all ;), and at later stage they gain a passion in Bioinformatics and learn it. When did you get inclined towards computational analysis of biological data?3254 days ago
Tryst
Tryst with a Bioinformatician # Dr Altan Kara
...ogical research and if a researcher wants to discover new biological...learning bioinformatics is the only way to achieve this goal. W...IUE: Southern Illinois University Edwardsville, School of Pharmacy....oinformatics tools. What you always miss in bioinformatics when...2377 days ago
Groups
...h bioinformatics as a field of study, is at an interesting crossroads. As an academic branch of learning, bioinformatics remains mostly what it always was — a cross-disciplinary endea...3968 days ago
...cal Extraction and Reporting Language) is a family of high-level, general-purpose, interpreted, dynamic programming languages. Perl was originally developed by Larry Wall in 1987 as a general-purpos...3968 days ago
- +9 more Groups
Tags
- The Shendure Lab is part of the Department of Genome Sciences at the University of Washington (Seattle, WA). The mission of the lab is to develop and apply new technologies in genomics and molecular biology. Most projects in the lab exploit new DNA sequencing technologies (Shendure et al., Nature...
Tags: Bioinformatics, Computational Biology, Genomics, Data Mining, University of Washington, Seattle, WA
3876 days ago
Comments
Comment on "Benchmarking Perl Module !"
...module, which provides a simple and standardized way to measure and compare the p...the form of a subroutine that runs the code you want to benchmark. Here's an exa...chmark module provides a simple and standardized way to measure and compare the p...431 days ago
Comment on "Short-read assembly using Spades !"
...quencing reads. SPAdes (St. Petersburg genome assembler) is a popular software tool for short-read assembl...unning SPAdes is usually as follows: spades.py -o output_directory -1 forward_reads.fastq -2 reverse_read...431 days ago
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