Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analysis, som...of alignment tools. Documentation Samtools Website BWA (Burrows-Wheeler Alignment) Website Additional too...Pipeline: PICS, rGADEM and MotIV (developer web site)...3627 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics Workbench - de novo and reference...tive and reproducible genomics. A job webportal. Genomatix - Integrated...ome builds for a number of organisms. Web Portal. OS independent. Vmatc...oston College. LookSeq - LookSeq is a web-based...3521 days ago
Apps for Busy Bioinformatics Researchers !!!
DNAApp: DNAApp: for iPhone/iPad This is an iOS app that allow...with other zip apps, and also web-tools like Blast, this app al...with other zip apps, and also web-tools like Blast, this app al...about mentha, visit mentha's website. This client application...dex includes a RSS reader and web browse...3544 days ago
Software packages for next gen sequence analysis
Integrated solutions * CLCbio Genomics Workbench - de novo and referenc...tive and reproducible genomics. A job webportal. * Genomatix - Integrat...ome builds for a number of organisms. Web Portal. OS independent. * Vma...ton College. * LookSeq - LookSeq is a web-based...3245 days ago
Comprehensive list of visualization tools for biological pathways
The study of biological pathways is a key to understand the different p...ne regulatory network models over the web http://www.biotapestry.org/...to them http://tinyurl.com/vitapad/ Web tools for pathways ArrayXPat...http://www.cs.bilkent.edu.tr/~patikaweb/ Reac...2289 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
Commercial tools Strand NGS offers many different tools i...esources; command-line or via web, can fetch data from a URL, b....com/PDF/NextGene_UsersManual_web.pdf Partek Genomics Suit...put: HOMOG.DAT - described on website Output: HOMOG.OUT I...CandiSNPer Description: web applic...2911 days ago
Worldwide funding agencies to fund your bioinformatics research !!
Are you seeking funding for research or training in a particular area? Check out t...gram: The IRGP seeks to promote research that will have a major impact in developing knowledge of Parkinson’...2940 days ago
Tools for Searching Repeats And Palindromic Sequences
What are genomic interspersed repeats? In the mid 1960's scientists discovered that many genomes c...iding the EMBOSS tools, for example: Wageningen Bioinformatics Webportal EMBOSS explorer Mobyle@Pasteur Soaplab2 Web Servic...2214 days ago
2876 days ago
Genome Assembly Tools and Software - PART1 !!
The genome assemblers generally take a file of short sequence reads and a file of qua...nmental Laboratory Visualization) is an interactive web-based tool for the visual exp...based Viral Genome Assembly pipeline VirAmp is a web-based...2688 days ago