Results for "abs"
Bio-Scripts
Create genome scaffolding with Perl
...f(($b1 eq $b2) || ($b1 eq " ") || ($b2 eq " ")){ ## equal bases, or absent bases, so consensus is eas...e = $qEnd - $qStart; my $tAliSize = $tEnd - $tStart; my $sizeDif = abs($qAliSize - $tAliSize); my...2318 days ago
Biological Sequence handling with Perl !
...|| 1; my $l = $self->length; my $seq = $frame > 0 ? $self->subseq($frame,$l-($l-$frame+1)%3) : $self->reverse->subseq(abs($frame),$l-($l-abs($frame)+1)%3); my $s = $se...2191 days ago
- ...curl && cpan install App::cpanminus ---> Using cache ---> e79748ebdffd Step 9/12 : RUN cpanm install File::chdir && cpanm install lib::abs && cpanm install File::Re...
1519 days ago
Perl script for six frame translation !
...mplement the sequence before translation my $revcomp_seq = $sequence->revcom; $translated_seq = $revcomp_seq->translate(-frame => abs($frame))->seq; }...104 days ago
Python script for six frame translation of sequences !
...quence.reverse_complement() translated_seq = reverse_complement[abs(frame)-1:].translate()...rd" if frame > 0 else "Reverse" print(f"Frame {frame_type} {abs(frame)} Translation:\n{protei...104 days ago
