Results for "algorithm"
Blogs
Computer simulation of genetic mechanism !!
...e Bayesian computation. https://sites.google.com/site/baysicsabc/ BEERS BEERS was designed to benchmark RNA-Seq alignment algorithms and also algorithms that aim to reconstruct diff...2978 days ago
Tools and Method for Haplotype phasing !
...ople.fas.harvard.edu/~junliu/plem/ “Read-backed phasing” algorithm: http://www.broadinstitute.org/gsa/wiki/index.php/Read-backed_phasing_algorithm SHAPE-IT: http://www.gr...1341 days ago
Structural variation: the hidden genomic treasure
...e been documented. Tools CNVnatora tool for CNV discovery and genotyping from depth of read mapping.2011a,2011b AGEa tools that implements an algorithm for optimal alignment of sequ...2705 days ago
Software and Tools to detect structure variation with long reads !!
...tion Tool. Why ask a single sv-detection approach to find every variant when you can have a parliament of tools deciding? Publication about the algorithm and “…the first...2611 days ago
- ...bsp;Thanks to the improvement of algorithms and of better sequencing and...sing graph theory. We develop an algorithm that identifies a most parsim...mplements and extend a suggested algorithmic approach by Behzadi and Vin...ors implements several alignment algorithms, an indel maximum likelihood...
2533 days ago
String graph based genome assembly software and tools !
...bsp;ABySS assembler and Richard Durbin. iii) Simpson-Durbin algorithm is that it does not rely on d...e used to form an assembly pipeline. SGA implements a set of assembly algorithms based on the FM-index. As th...2331 days ago
List of motif discovery tools !
...Use a collection of bioinformatics tools at this portal site. T-REKS -- identification of Tandem REpeats in sequences with a K-meanS based algorithm Find information about tande...1996 days ago
Bioinformatics tools for telomere to telomere assembly !
...improved consensus accuracy (Arang Rhie)● PanGenie – algorithm that leverages a pangenome re... @rocioadh)● tama (Transcriptome Annotation by Modular Algorithms) – software designed f...995 days ago
Useful Bioinformatics Analysis Tools !
...p;Scientific Reports, 2017; 7(41553):• Gudys, A., Deorowicz, S., QuickProbs – A Fast Multiple Sequence Alignment Algorithm Designed for Graphics Process...866 days ago
Common methods to discover tandem repeats
...epeats in DNA sequences. It is available for free download and can be used on both nucleotide and protein sequences. The tool uses a statistical algorithm to identify repeats based on...426 days ago
