Results for "align"
Top-level pages
...uction to Bioinformatics Algorithms Lectures 1-2 by Dr. Max Alekseyev USC, 2009 Online Lectures on Bioinformatics Sequence Alignment Algorithms Algorithm for sequence alignment: dynamic programming Net...3953 days ago
Bioinformatics Courses Around the World
...mann Institute of Science, Israel) Rutgers University, PhD Program in Computational Biology (Newark, New Jersey) Sequence Alignment and Modeling System ...3950 days ago
- 1.Xcode Life Sciences Pvt. Ltd.6B, Eldorado, 112, Nungambakkam High Road,Nungambakkam, Chennai 600034Tamil Nadu, India 2.Mapmygenome™Royal Demeure,HU...
3926 days ago
Most Commonly used Awk by Bioinformatician
Awk is a programming language that is specifically designed for quickly manipulating space delimited data. Although you can achieve all its functionality with...3919 days ago
Perl one-liner for bioinformatician !!!
...atternperl -ne 'print ++$a." $_" if /regex/' #Number and print only lines that match a patternperl -ne 'printf "%-5d %s", $., $_ if /regex/' #Left align lines with 5 white spaces if...3634 days ago
Next generation sequencing in R or bioconductor environment
...s - GRanges, GRangesList and GappedAlignments - which are supporting o...ackage allows to search a set of unaligned DNA sequences for a shared...ting samtools BAM formatted binary alignment data. SAM/BAM is quickly...rt for importing into R short read alignment data in BAM format (via R...3631 days ago
Commercial and public next-gen-seq (NGS) software
...to find semiglobal non-gapped alignments based on k-mer seeds. ht...nome of any size. It seeks to align reads from nonunique repeats.../www.gene.com/share/gmap/) to alignment Solexa reads. GMAP is fre...ool for spliced and unspliced alignments and SNP detection of sho...3525 days ago
List of Biotechnology Research Laboratory, University, and Centre in India
DEPARTMENT OF BIOTECHNOLOGY Centre For DNA Fingerprinting And Diagnostics (CDFD), Hyderabad ( Institute of Bioresources and Sustainable Development (IBSD),...2577 days ago
Software packages for next gen sequence analysis
..., memory-efficient short read aligner. It aligns short DNA sequen...nome of any size. It seeks to align reads from nonunique repeats...C++ for Linux/Alpha. * SOCS - Aligns SOLiD data. SOCS is built on...ool for analyzing cross_match alignments. Developed by Rene Warre...3249 days ago
Binding Site Prediction in Protein !
The interaction between proteins and other molecules is fundamental to all biological functions. In this section we include tools that can assist in prediction of inte...2209 days ago
