Results for "alignments"
Comments
Comment on "Basic command-line to run BLAST"
..."words," and searching for matches to those words in the database. It then expands the matches to identify longer regions of similarity, called "alignments," and calculates a score for...419 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
halSynteny: a fast, easy-to-use conserved synteny block construction method for multiple whole-genome alignments https://pubmed.ncbi.nlm.nih.gov/32463100/1243 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
...test input in computational synteny halSynteny: a fast, easy-to-use conserved synteny block construction method for multiple whole-genome alignments https://academic.oup.com/gig...1429 days ago
Comment on "Bioinformatics tools developed for Oxford Nanopore data analysis !"
NanoComp: comparing multiple runs NanoStat: statistic summary report of reads or alignments NanoFilt: filtering and trimming of reads NanoLyse: removing contaminant reads (e.g. lambda control DNA) from fastq2252 days ago
Comment on "GraphMap - A highly sensitive and accurate mapper for long, error-prone reads"
...ce sequence and used for mapping. Output SAM alignments will be in genome space (not...sion or corrupt. [false] -u, --ordered - SAM alignments will be output after the proc...ame sequences, and outputs lenient secondary alignments. [false] --no-self-hits - Sim...2290 days ago
Comment on "RACA: Reference-Assisted Chromosome Assembly"
Chromosomer – a reference-based genome arrangement tool, which rapidly builds chromosomes from genome contigs or scaffolds using their alignments to a reference genome of a closel...2770 days ago
Comment on "Ruby and BioRuby Tutorials"
Tutorial for multiple sequence alignments and phylogenetic methods in BioRuby http://thebird.nl/bioruby/Tutorial.rd.html https://code.google.com/p/forester/wiki/PhyloBioRuby A...3903 days ago
