Results for "benchmarking and designing tools"
Blogs
barrnap - https://github.com/tseemann/barrnap CPAT - https://github.c...ver) CPC2 - https://github.com/gao-lab/CPC2_standalone,...p://www.cbs.dtu.dk/services/RNAmmer/ (web server, standal...545 days ago
Tools for Differential expression analysis
apeglm - https://bioconductor.org/packages/release/bioc/html/ape...ps://bioconductor.org/packages/release/bioc/html/RUVSeq.html SARTools - https://github.com/PF2-pasteur-fr/SARTools tximport - https:/...545 days ago
Bioinformatics tools to explore SSRs in genomes !
There are several bioinformatics tools that can be used to explore...uences from various organisms and can identify perfect, compound, and imper...an be used to analyze genomic and transcriptomic sequences from v...ions, you may find that other tools are more appropriate for your...426 days ago
Common steps for reads mapping !
Mapping reads to a reference genome is an e...ailable, such as BWA, Bowtie, and HISAT2. Choose a mapper that...ppers have their own indexing tools. Prepare the read data...he mapper is run with the command-line...ty, removing duplicate reads, and calling variants. Overall,...424 days ago
Steps to find palindrome in genomes !
Palindromes are sequences of nucleotides th...uences using pattern matching tools, such as regular expression...enome sequence against itself and examining the diagonal patter...iction enzymes, such as EcoRI and HindI...rovide a comprehensive understanding of the palindromic landscape...424 days ago
Free Books on Machine Learning and Artificial Intelligent !
An Introduction to Statistical LearningThis book provides a broad and less technical treatment of k...ho wishes to use contemporary tools for data analysis. https:/...ite.pdf Python Data Science HandbookYou’ll learn how to...knowledge of machine learning and deep learning and want to dive...417 days ago
Bioinformatics Tools for Phylogeny !
Direct access to the individual tools available on this server. Multiple Alignment:Phylogeny:Tree viewers:Utilities: MUSCLE PhyML TreeDyn Gblocks T-Coffee /&n...182 days ago
- Downloading 16S rRNA databases can be crucial for various bioin...in batches using the provided tools. GreenGenes: Gree...ng classification, alignment, and phylo...ding taxonomic classification and alignment. Ribosomal Dat...rRNA sequences. It provides tools for sequence analysis and cla...
12 days ago
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