Results for "binary files"
Top-level pages
An algorithm is a computable set of steps to achieve a desired result. We use algorithm...e mid-1900's:- George Boole (1847) has invented the binary algebra, the basis of compute...an be obtained in conquer phase by merging them.The binar...3948 days ago
- Genomics is the study of the genomes of organisms. The field includes i...anslation. Chromas It will display and prints chromatogram files from ABI automated DNA sequencers, and Staden SCF files which the analysis programs f...
3944 days ago
Bioinformatics Courses Around the World
Bioinformatics Courses around the world Here is the list Bioinformatics courses offered around the world. Reasons for constructing this page are: To show the exten...3945 days ago
Structure of Binary files used for storing sequencing data-bam and sff
...times bioinformatician needs to parse binary files like bam and sff. Advantage of binary files is that they occupy less spac...12) sff file (for Ion torrent and 454 files): http://www.ncbi.nlm.nih.go...;f=formats&m=doc&s=format#sff Binary file Editor and Viewer: htt...3922 days ago
Most Commonly used Awk by Bioinformatician
Awk is a programming language that is specifically designed for quickly manip...awk '{print $0,$2+$3}' input.txt awk '{$1=$2+$3;print}' input.txt join two files on column 1: awk 'BEGIN{whil...3914 days ago
List of bioinformatics open source projects/software.
Open source software is software that can be freely used,...lk.de/ Tool for filtering sequence variants in VCF files. Network for scientists and c...Vector NTI, a tool to analyze and edit DNA sequence files Integrated Genome Browser h...3758 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
List of generic simulation software/tools/resource with br...ml#metasimRNA Seq Simulator RSS takes SAM alignment files from RNA-Seq data and simulat...package simulating the evolution of copy number profiles along a tree. http://bit.ly/s...3739 days ago
List of In-silico Binding Site Prediction Tools
...B. The sc-PDB database provides separated MOL2 files for the ligand, its binding si...and analyze atom accessibility. MolAxis reads files in the standard Protein Data...le under the Gnu Public Licence. A precompiled binary (X86) can be downloaded free...3746 days ago
Perl one-liner for bioinformatician !!!
With the emergence of NGS technologies, and sequencing dat...g and printing certain lines, parsing logs, editing files in-place, doing statistics, c...ut system administration tasks, updating a bunch of files at once, and many more. Perl...3630 days ago
Next generation sequencing in R or bioconductor environment
...ls provides functions for parsing and inspecting samtools BAM formatted binary alignment data. SAM/BAM is qu...ch a count table can be imported into R or generated from BAM alignment files using the countOverlaps funct...3626 days ago
