Results for "bioInf"
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QUAST: quality assessment tool for genome assemblies
...th and without a given reference genome.The tool accepts multiple assemblies, thus is suitable for comparison. More at http://bioinf.spbau.ru/quast http://bioinformatics.oxfordjournals.org/co...2946 days ago
- ...install and run SPAdes. SPAdes version 3.7.1 was released under GPLv2 on March 8, 2016 and can be downloaded from http://bioinf.spbau.ru/en/spades. Manual at http://spades.bioinf.spbau.ru/release3.7.1/manual....
2933 days ago
- ...sp; segemehl implements a matching strategy based on enhanced suffix arrays (ESA). More at http://www.bioinf.uni-leipzig.de/Software/segemehl/ Manual http://www.bioinf.uni-leipzig.de/Software/segem...
2912 days ago
Rectangle Graph for Repeat Resolution in Genome Assembly
...details see: Nikolay Vyahhi, Son K. Pham, Pavel Pevzner. From de Bruijn Graphs to Rectangle Graphs for Genome Assembly, Lecture Notes in Bioinformatics 7534 (2012), pp....2315 days ago
- ...e GWAS and GP studies in this NGS era. Code and documentation of Heap are freely available from https://github.com/meiji-bioinf/heap and our web site (http://bioinf.mind.meiji.ac.jp/lab/en/tools...
2203 days ago
NanoPack: visualizing and processing long-read sequencing data
...le as a graphical user interface, a web service at http://nanoplot.bioinf.be and command line tools. https://academic.oup.com/bioinformatics/article/34/15/2666/49...2090 days ago
NanoPack: visualizing and processing long-read sequencing data
...ble with Linux, Mac OS and the MS Windows 10 subsystem for Linux and are available as a graphical user interface, a web service at http://nanoplot.bioinf.be and command line tools.1952 days ago
Sibelia: A comparative genomics tool
...egions that present in one group of genomes but not in others, (3) rearrangements that transform one genome to other genomes. More at http://bioinf.spbau.ru/sibelia Sibelia doc...1347 days ago
- ...nctionality of these kernels in a novel way to take the position of patterns in the sequences into account for the similarity measure. http://www.bioinf.jku.at/software/kebabs/ http...
788 days ago
