Results for "bulk"
Blogs
Five key traits to seek out in potential bioinformatics candidates !!!
Genomics and proteomics data are being collected in bulk, but mostly, traditional biologist don’t know what to do with it. Perhaps this is the reason why (not only this!!! ) co...3206 days ago
Bookmarks
kallisto: a program for quantifying abundances of transcripts from bulk and single-cell RNA-Seq data
kallisto is a program for quantifying abundances of transcripts from bulk and single-cell RNA-Seq data, or more generally of target sequences using high-throughput sequencing re...1960 days ago
RNA-Bloom: a fast and memory-efficient de novo transcript sequence assembler
...memory-efficient de novo transcript sequence assembler. It is designed for the following sequencing data types: single-end/paired-end bulk RNA-seq (strand-specific/agno...1412 days ago
Top-level pages
List of In-silico Binding Site Prediction Tools
.../run_depth.html Depth measures the closest distance of a residue/atom to bulk solvent. Accessible surface a...utes channels that connect a single point (like an inner chamber) to the bulk solvent, and it also computes...3759 days ago
Genome Assembly Tools and Software - PART1 !!
...HaploClique is a computational approach to reconstruct the structure of a viral quasispecies from next-generation sequencing data as obtained from bulk sequencing of mixed virus sam...2701 days ago
News
GenBank release 257.0 is now available!
...s containing 22,294,446,104,543 base pairs of sequence data 686,271,945 bulk-oriented TSA records containing 646,176,166,908 base pairs of sequence data 124,421,006 bulk-oriented TLS records containi...272 days ago
Opportunity posts
Postdoc position in computational biology/single-cell sequencing @ UCSF -- San Francisco, CA (US)
...euro-development. RESPONSIBILITIES The postdoc will develop statistical and computational tools, analyze, interpret and integrate single-cell and bulk 'omics data. REQUIREMENTS W...2340 days ago
ResearchLabs posts
- ...lonal evolution, invasion, metastasis and chemoresistance. These processes have previously been difficult to study with genomic technologies using bulk tissues More at http://www...
2924 days ago
Tags
kallisto: a program for quantifying abundances of transcripts from bulk and single-cell RNA-Seq data
kallisto is a program for quantifying abundances of transcripts from bulk and single-cell RNA-Seq data, or more generally of target sequences using high-throughput sequencing reads. It is based on the novel idea of pseudoalignment for rapidly determining the compatibility of reads ...Tags: kallisto, program, quantify, abundances, transcripts, bulk, single-cell, RNA-Seq, data
1960 days ago
