Results for "calculator"

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  • CovCal: Coverage / Read Count Calculator

    Coverage / Read Count Calculator Calculate how much sequencing you need to hit a target depth of covera...hen Turner, based on the Lander-Waterman formula, inspired by a similar calculator written by James Hadfield. Co...

    2181 days ago

  • Ka, Ks and Ka/Ks calculations

    ...eq, formatdb and fastacmd), PAML (including codeml and yn00) and KaKs_Calculator (including 10 substitution ra...ted.  Look for KaKs calculation: https://github.com/fumba/kaks-calculator http://longlab.uchicago.edu/...

    2821 days ago

  • Genome sequence-based (sub-)species delineation.

    ...lls of classic DDH, and also calculates differences in genomic G+C content. http://ggdc.dsmz.de/ggdc_background.php# Genome-to-Genome Distance Calculator 2.1 http://ggdc.dsmz.de/ggdc...

    1986 days ago

  • Machine learning in Perl

    this is a fourth blog post in the Machine learning in Perl series, focusing on the AI::MXNet, a Perl interface to Apache MXNet, a modern and powerful machine learnin...

    1555 days ago

  • CoverM: Read coverage calculator for metagenomics

    CoverM aims to be a configurable, easy to use and fast DNA read coverage and relative abundance calculator focused on metagenomics applications. CoverM calculates coverage of genomes/M...

    1117 days ago

  • TMRCA Calculator

    ...nvention using generations is changed from an earlier version of this calculator which used "transmission even...lation becomes inaccurate. https://clandonaldusa.org/index.php/tmrca-calculator

    1202 days ago