ZENBU: a collaborative, omics data integration and interactive visualization system
...h users can uploaded from BAM, BED, GFF and tab-text files. Please check our documentation wiki for details on how to use the system, or check out some of the views above.1960 days ago
UpSetR: An R Package for the Visualization of Intersecting Sets and their Properties
...y statistics derived from subset or element attributes. For further details about the original technique see the UpSet website. You can also check out the UpSetR shiny app...1936 days ago
1796 days ago
1552 days ago
Juicebox: Visualization and analysis software for Hi-C data
...rimarily to usage of command line tools and the Juicebox jar files. Juicebox can now be used to visualize and interactively (re)assemble genomes. Check out the Juicebox Assembly Too...1548 days ago
1540 days ago
shinyChromosome:a GUI for the interactive creation of non-circular whole genome diagrams
...menu. To cretae two-genome plot for comparison of data across two genomes, go to the Two-genome plot menu. For the detail format of input data, check the Input data format submenu...1540 days ago
HS3D: Homo Sapiens Splice Sites Dataset
...quence, length, G+C content, presence of not AGCT data (nucleotide scan check)). Statistics are also reported (overall nucleotides, average G+C content, nucleotide scan check results, number of not GT sta...1435 days ago
sunbeam: A robust, extensible metagenomics pipeline
...cies, so it doesn't have pre-existing dependencies or admin privileges, and can be deployed on most Linux workstations and clusters. To read more, check out our paper in Microbi...1430 days ago
1211 days ago