Kraken: ultrafast metagenomic sequence classification using exact alignments
...or this task have been relatively slow and computationally expensive, forcing researchers to use faster abundance estimation programs, which only classify small subsets of metagenomic...2881 days ago
2829 days ago
2776 days ago
Retrieving Taxonomic Information with R
...d and for organism specific information retrieval. Specifically, the taxonomy() function implemented in myTAI can be used to classify genomes according to phylogen...1723 days ago
885 days ago
Metabuli 분리 improves metagenomic read classification
...s using a novel k-mer structure, metamer, to enable both specific and sensitive characterization of metagenomic samples. In addition, it can classify reads against a database of a...348 days ago
doubletrouble: identify duplicated genes from whole-genome protein sequences and classify
...genes from whole-genome protein sequences and classify them based on their modes of...(small-scale duplication) gene pairs. Besides classifying gene pairs, users can also...ions with Gaussian Mixture Models (GMMs), and classify gene pairs into age groups ba...73 days ago
50 days ago