Results for "clustering"
Top-level pages
...nstruction, prediction and classification of protein structure, prediction of RNA structure, prediction of protein function, and expression data clustering. Algorithmic development is a...3960 days ago
- ...l as legitimate or spam. Common algorithms include decision tree learning, nearest neighbor, naive Bayesian classification and neural networks. Clustering - Is like classification but...
3959 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...-read sequences. Catchen et al., G3: Genes, Genomes, Genetics, 1:171-182, 2011. Full Text, Home Page Rainbow: an integrated tool for efficient clustering and assembling RAD-seq reads....3792 days ago
List of In-silico Binding Site Prediction Tools
...in proteins. The method is purely geometry-based and proceeds in two stages, labeling of grid cells with depth factors followed by a depth based clustering that uses neighbourhood infor...3756 days ago
Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
----------- Gene Set Clustering based on Functional annotation GeneSCF serves as command line tool for clustering the list of genes given by th...2884 days ago
Genome Assembly Tools and Software - PART1 !!
...c regions (sequence targets) of interest. Rainbow v2.0.4 – Clustering and Assembling Short Reads, e...Rainbow package consists of several programs used for RAD-seq related clustering and de novo assembly. CA...2698 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...error-containing long sequence (e.g., ONT or PacBio reads, draft genomes) Software (Perl) https://github.com/warrenlr/LINKS/ Read clustering afcluster Clustering of reads from different genes...2384 days ago
Single Cell RNAseq data analysis tutorial !!
...incera: A Computational Pipeline for Single Cell RNA-Seq Profiling Analysis https://research.cchmc.org/pbge/sincera.html SC3 – consensus clustering of single-cell RNA-Seq data...2363 days ago
List of visualization tools for network biology
...tp://tinyurl.com/navigator1/ N-Browse Interactive graphical browser for biological networks http://www.gnetbrowse.org/ NeAT Topological and clustering analysis of networks http://...2301 days ago
Webinar on RNA-Seq Data Analysis on 28 Feb 2018
...dentification of novel genes, exons and novel splice junctions.We will highlight the use of Strand NGS features such as PCA, sample correlation, clustering, Venn diagrams, CVA, UMI supp...2277 days ago
