Results for "coarse-grained"
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...on a nominal desktop computer. Cgaln performs an alignment job in two steps, at the block level and then at the nucleotide level. The former "coarse-grained" alignment can explore genomi...2649 days ago
eQuant : energy-based quality assessment of protein
...d reliability of these particular protein structures.eQuant is a service for structure quality assessment of single proteins, which utilizes a coarse-grained energy model. The overall qua...2527 days ago
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Awesome perl frameworks, libraries and software - PART 3
fujiwara/perl-queue-q4pg-lite - simple message queue using PostgreSQL. formbuilder/formbuilder - Perl CGI::FormBuilder module for generating, validating, and p...2514 days ago
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oGNM:Conformational dynamics based on contact topology in a coarse-grained presentation
Gaussian Network Model (GNM) is a powerful tool to sample conformational dynamics based on contact topology in a coarse-grained presentation. Here we present a method to consider protein dynamics in the presence of ‘environment’ (1). The ‘environment’ here can be crystal c...Tags: conformational, dynamics, contact, topology, coarse-grained, presentation, oGNM
859 days ago
