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ncbi-datasets-cli -- Quickstart: command line tools !
...dataformat . Use datasets to download biological sequence data across all domains of life from NCBI. Use dataformat to convert metadata from JSON Lines...879 days ago
- To convert a VCF into a MAF, each variant must be mapped to only one of all possible gene transcripts/isoforms that it might affect. But even within a single isoform, a M...
869 days ago
ALE: Assembly Likelihood Estimator
Just import the assembly, bam and ALE scores. You can convert the .ale file to a set of .wig files with ale2wiggle.py and IGV can read those directly. Depending on your genome size you may want to convert the .wig files to the BigWig format.423 days ago
- g:Convert enables to convert between various gene, protein, microarray probe and numerous other types of namespaces. We provide at least 40 types of IDs for more than 60 specie...
350 days ago
ExRec: Exclusion of Recombined DNA
.... The pipeline consists of five standalone applications: the first two convert folders of NEXUS or PHYLIP fi...ks from loci (a newer approach). Two other applications in the package convert the recombination-filtered da...38 days ago
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