Results for "copy"
Top-level pages
List of generic simulation software/tools/resource with brief description and homepage !!!
...recombination patterns over large genomic regions under various demographic models http://cmpg.unibe.ch/software/simcoal2/SimCopy An R package simulating the evolution of copy number profiles along a tree....3752 days ago
Commercial and public next-gen-seq (NGS) software
...A-Seq, DNA Methylation, Gene Expression, Exon, miRNA Expression, Copy Number, Allele-Specific Copy Number, LOH, Association, Tri...ir Science publication CNV-Seq - CNV-seq, a new method to detect copy number variation using high-t...3533 days ago
Apps for Busy Bioinformatics Researchers !!!
...tools such as "Reverse Complement", "Jump to", "Copy and Paste sequences", fast an...aining cell lines can be queried for mutations. Copy Number Variation (CNV) plots...ome sequencing data including small variations, copy number variations (CNVs), and...3556 days ago
Software packages for next gen sequence analysis
...n's lab at UCLA). POSIX. * CHiPSeq - Program used by Johnson et al. (2007) in their Science publication * CNV-Seq - CNV-seq, a new method to detect copy number variation using high-t...3257 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
..., Mother-Father-Child Trio analysis, DNA Copy number including allele specific copy number and Loss of Heterozygo...ne program; “accurate detection of copy number alteration and loss of...te purity and ploidy to compute absolute copy number and mutation multiplic...2923 days ago
- ...dir recursively cp file1 file2 — copy file1 to file2 cp -r dir1 dir2 — copy directory dir1 to dir2 recurs... scp user@host:file dir — secure copy a file from remote server to...
2889 days ago
Genome Assembly Tools and Software - PART1 !!
..., novel sequence insertions, translocations and copy numbers REPdenovo &ndash...lso provide the average coverage (indicates the copy number) for each constructed...ssembly and Annotation Completeness with Single-copy Orthologs BUSCO completene...2700 days ago
Quick next generation sequencing (NGS) terms definition
...Poisson distribution. Therefore, if the read depth over a certain region deviates significantly from this distribution, it signals for a potential copy number variation (CNV)....2537 days ago
Awesome perl frameworks, libraries and software - PART 1
...lModules - (Very) simple scripts for some Perl modules, intended as copy paste templates. Ovid/Role-B...bruceravel/demeter - Process and analyze X-ray Absorption Spectroscopy data using Feff and either La...2504 days ago
- ...p; b3 400 a4 b4 Now copy and paste the table above in...Col1,Col2,Col3 100,a1,b1 200,a2,b2 300,a3,b3 After we copy and paste the data above in a...
2504 days ago
