2181 days ago
Pollux: platform independent error correction of single and mixed genomes
...rs introduced by Illumina, Ion Torrent, and Roche 454 sequencing technologies and can be applied to single- or mixed-genome data. In addition to correcting substitution errors, we locat...2558 days ago
Genome Assembly Tools and Software - PART2 !!
...utomatically high quality sequence by ordering contigs, closing gaps, correcting sequence errors and transferr...ontains programs that support mapping of reads to a reference genome, correcting sequencing errors by locally...2701 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...titative transcript expression profiling. Łabaj et al, Bioinformatics 27:i383 - i391, 2011 Full Text Improving RNA-Seq expression estimates by correcting for fragment bias. Roberts et...3794 days ago
Tools for bacterial whole genome annotation
...es of gaps between them; (ii) IMAGE uses paired-end reads to extend contigs and close gaps within the scaffolds; (iii) ICORN for identifying and correcting small errors in consensus seq...2346 days ago
3900 days ago
Tadpole is 250x faster than SPADes assembler !
...halt correction in that direction. rbi=t (requirebidirectional) Require agreement from both directions when correcting errors in the middle part of...991 days ago