Bioinformatics tools developed for Oxford Nanopore data analysis !
...re MinION long reads LQSDALIGNER, Celera OLC Nanocorrect, Nanopolish correctorhttps://github.com/jts/nanopolish PBcRHGAP or BLASR, Celera OLC PBcR correctorhttp://wgs-assembler.sourcefor...2320 days ago
Useful Bioinformatics Analysis Tools !
...cessors, PLOS ONE, 2014; 9(2):e88901, RECKONER Read error corrector. • Maciej Długosz, M., Deorowicz, S., RECKONER: read error corrector based on KMC, Bioinforma...862 days ago
Pollux: platform independent error correction of single and mixed genomes
Pollux: General-purpose error corrector that corrects errors introduced by Illumina, Ion Torrent, and Roche 454 sequencing technologies and can be applied to single- or mixed-genome da...2542 days ago
QuorUM: An Error Corrector for Illumina Reads
Illumina Sequencing data can provide high coverage of a genome by relatively short (most often 100 bp to 150 bp) reads at a low cost. Even with low (advertised 1%) error...2369 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...edfile (processed by MAKEPED) and datafile (reflects loci for each individual; set in PREPLINK) Output: MAC Description: MNV Annotation Corrector; Ad hoc software, fixes incor...2908 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...tion of sequencing errors in raw, whole genome sequencing reads (k-mer based) Software (C++) https://github.com/mourisl/Lighter QuorUM Error corrector for Illumina reads using k-me...2370 days ago
QuorUM: An Error Corrector for Illumina Reads
Illumina Sequencing data can provide high coverage of a genome by relatively short (most often 100 bp to 150 bp) reads at a low cost. Even with low (advertised 1%) error rate, 100 × coverage Illumina data on average has an error in some read at every base in the genome. These errors make ha...Tags: QuorUM, Error, Corrector, Illumina, Reads
2369 days ago
QuorUM: An Error Corrector for Illumina Reads
We produce trimmed and error-corrected reads that result in assemblies with longer contigs and fewer errors. We compared QuorUM against several published error correctors and found that it is the best performer in most metrics we use. QuorUM is efficiently implemented making use of current multi-...Tags: QuorUM, Error, Corrector, Illumina, Reads
1550 days ago