Results for "d3"

Bio-Scripts

  • Commands to install conda in Ubuntu !

    ...installing: jeepney-0.4-py37_0 ... installing: kiwisolver-1.0.1-py37hf484d3e_0 ... installing: lazy-obje...stalling: simplegeneric-0.8.1-py37_2 ... installing: sip-4.19.8-py37hf484d3e_0 ... installing: six-1.12....

    1508 days ago

  • Basic docker commands !

    ...d9fee7fee8c6dcf548bbb0af6a63bd02d5629f2189f8 deleted: sha256:d8c4b90ecbd8d3ad6a09a34c5880d9d68233ec2e5760...Read && cpanm install Statistics::ChiSquare ---> Using cache ---> d34787da52e0 Step 10/12 : WORKD...

    1505 days ago

  • Setting up autoConTAMPR !

    (base) jit@jit-HP-Pro-3335-MT:~/Downloads/testDock$ docker build -t autocontampr . Sending build context to Docker daemon 9.024MB Step 1/16 : FROM ubuntu:14.04 -...

    1438 days ago

  • Install SibeliaZ in your Linux cluster !

    ...h06a4308_0 121 KB certifi-2020.6.20 | pyhd3eb1b0_3 155 KB ma...n/linux-64::certifi-2019.9.11~ --> pkgs/main/noarch::certifi-2020.6.20-pyhd3eb1b0_3 openssl...

    1229 days ago

  • Install grabseqs with conda !

    (JitMetaENV) ➜ JitMeta conda install grabseqs -c louiejtaylor -c bioconda -c conda-forge Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

    1213 days ago

  • Install fastqc using conda !

    (JitMetaENV) ➜ JitMeta conda install -c bioconda fastqc Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

    1213 days ago

  • trimmomatic command !

    (JitMetaENV) ➜ fastQC_out trimmomatic SE -phred33 SRR5322499_1.fastq out.trimmed.fastq LEADING:3 TRAILING...IDINGWINDOW:4:15 MINLEN:36 TrimmomaticSE: Started with arguments: -phred33 SRR5322499_1.fastq out.trimm...

    1213 days ago

  • Install quast using conda !

    (JitMetaENV) ➜ ~ conda install -c bioconda quast Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer vers...

    1212 days ago

  • Install prokka using conda !

    (JitMetaENV) ➜ assembly conda install -c bioconda prokka Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen...

    1212 days ago

  • Install maxbin2 using conda !

    (JitMetaENV) ➜ day3 conda install -c bioconda maxbin2 Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen sol...

    1211 days ago