Structural variation: the hidden genomic treasure
...hods of detection in next generation sequencing data (paired end mapping, split re...ure (Source: NatRev Genetics) Related tools, databases and publications are lis...genotyping and visualization in deep sequencing data Link PEMer, structu...2701 days ago
Important Journals, Blogs and Forums for Bioinformaticians
...ndMe - the Spitoon Variance Explained: David Robinson’s blog (Data Scientist at Stack Overflow,...xtgenseek.com: Next-Gen Sequencing Blog covering new developments in NGS data & analysis. RNA-Seq Blog...2641 days ago
Software and Tools to detect structure variation with long reads !!
...single genomes or trios reveals triple the SVs detectable by short-read data. With Single Molecule,...ak-SV: It identifies structural variants from next-generation paired end data, third-generation long read d...2606 days ago
List of GOI approved peer reviewed bioinformatics and computational biology journals
...l Journal of Bioinformatics Research and ApplicationScopusBiochemistry, Genetics and Molecular Biology; Medicine, Health International Journal o f Data M ining and Bioinformatics Wo...2565 days ago
2528 days ago
DNA testing companies around the globe !
...n market Genographic Project (admixture, deep ancestry) Genos Research Inc (DTC whole exome sequencing; consumer focused healthcare big data spin out from Complete Genomi...2485 days ago
List of genome announcement, notes and reporting journals
...ng number of articles describing DNA data and a need for more appropriate venues to present these data, some publishers and journals...or supplemental material to present data or analysis. Link: https://m...levant organism in the corresponding database (for eukaryotes, advanced...2006 days ago
String graph based genome assembly software and tools !
...assembling large genomes from NGS data caught our attention for seve...omes from high coverage short read data. SGA is designed as a modular...e uses paired end and/or mate pair data to build scaffolds from the c...of large genomes using compressed data structures - Jared T. Simpson...2327 days ago
List of cancer genomics research web resources !
...CGHub https://cghub.ucsc.edu/ Comprehensive data repository; huge data size EGA https://www.ebi.ac....ancer.sanger.ac.uk Largest somatic mutation database; genome sequencing paper...g/ Comprehensive analysis of tumor profile; Data from 90 studies involving mor...2318 days ago
Bioinformatics tools developed for Oxford Nanopore data analysis !
...sh;20 Gb of DNA sequence data. Ultra-long read lengths are...of the technical advantages of ONT data is the read length, which off...ools developed for Oxford Nanopore data BWA Fast nanopore data tuned...rection tool for nanopore sequence datahttps://github.com/jgurtowski/...2318 days ago