Results for "data analysis"
Top-level pages
...t DBs and tools related with miRNA: miRNA Sequencing data analysis : http://tools.genxp...7_prediction.html Idea of analysing miRNA Sequencing data : http://www.illumina.com/applications/epigenetics/small_rna_analysis.ilmn More: http://www.bioco...3506 days ago
Apps for Busy Bioinformatics Researchers !!!
...at allows for the opening and analysis of DNA sequencing files -...ns, COSMIC mutations, and CNV data for cell lines. Does not req...network connection for local databases. View and search PubMed in...mic Variations and many other databases to retrieve up-to-date annot...3551 days ago
- ...ranscriptomics and proteomics data, interactions between genes i...ayCourse/Lectures09/Pathway%20Analysis.pdf http://gettinggeneticsdo...ys_2014_Module2.pdf Impotant Database and Tools: GeneMANIA, Cytosc...earch/index.html?q=Enrichment+analysis+
3506 days ago
A guide for complete R beginners !
...need to perform some basic analysis: load a table, plot...application specific tasks. e.g. analysis of microarray experiments...form again and again on different data Disadvantages Lack of a...l) Download and save the tutorial data set from http://bioinformatics...3371 days ago
Software packages for next gen sequence analysis
...or Next Generation Sequencing data analysis. * JMP Genomics - Next ge.... Supports Illumina and SOLiD data. De novo Align/Assemble * ABySS...pecifically optimized for the analysis of large numbers (millions) o...nding sites based on ChIP-Seq data. (C++) * SISSRs - Site Identifica...3253 days ago
Comprehensive list of visualization tools for biological pathways
...one leading method in -omics data analysis and visualization. Fol...apestry.org/ Caleydo Visual analysis framework targeted at biomolecular data. Visualization of interdepend...ronment composed of a central database and a visual editor, built ar...2297 days ago
Binding Site Prediction in Protein !
The interaction between proteins and other molecules is fundamental to all biologic...and quantitation of their volumes. PocketPicker Grid-based technique for the analysis of protein pockets. PocketPic...2212 days ago
- Reformat is a member of the BBMap/BBTools package. It is a multipurpose tool designed for converting reads or other nucleotide data between different formats. It...erleaved files It is multithreaded and can process data at...
2724 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...BED, Agilent files, NimbleGen data summary files, VCF files, Impute2...om high-throughput sequencing datasets; calls variants found in <...udying using ion channels for analysis of single RNA/DNA structures)...K) Output: Downstream Analysis of Variants PrediXcan D...2919 days ago
Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
...CF supports more organisms from V1.1. Examples to download database as simple text file using GeneSCF "prepare_database" module, 1) https://www.b...ver other enrichment tools is that, it performs enrichment analysis in real-time (v1.1 and above)...2882 days ago
