String graph based genome assembly software and tools !
...rbin. iii) Simpson-Durbin algorithm is that it does not rely on de Bruijn graphs, and instead employs a...or de novo genome assembly. As opposed to most assemblers, which are de Bruijn graph based, SAGE uses the st...2329 days ago
Bioinformatics tools developed for Oxford Nanopore data analysis !
...types of algorithms, such as greedy, overlap-layout-consensus (OLC), de Bruijn graph (DBG), and string graph...tegrateOLChttps://github.com/mariokostelac/ra-integrate/ ALLPATHS-LGde Bruijn graph ALLPATHS-L correctorhtt...2320 days ago
Bioinformatics tools for telomere to telomere assembly !
...; tools for filtering, comparing, and annotating structural variant (SV) calls in VCF format (Aaron Wenger)● JumboDB – tool for de Bruijn graph construction (Anton Ban...992 days ago