CANU: Assembling Large Genomes with Single-Molecule Sequencing and Locality Sensitive Hashing.
Canu is a fork of the Celera Assembler designed for high-noise single-molecule sequencing (such as the PacBio RSII or O...2931 days ago
2931 days ago
2931 days ago
Hagfish - assess an assembly through creative use of coverage plots
Hagfish is a tool that is to be used in data analysis of Next Generation Sequencing (NGS) experiments. Hagfish bu...tification of structural variation in a genome re-sequencing experiment. Hagfish requires...2923 days ago
MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping
MOSAIK is a stable, sensitive and open-sou...mapping second and third-generation sequencing reads to a reference genome....gn reads generated by all the major sequencing technologies, including Illum...appings for all the generated data (sequencing technologies, low-coverage an...2923 days ago
2923 days ago
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2900 days ago
2183 days ago
CovCal: Coverage / Read Count Calculator
Coverage / Read Count Calculator Calculate how much sequencing you need to hit a target depth of coverage (or vice versa). Instructions: set the read length/configuration and genome size, then s...2183 days ago