Results for "df"

Bio-Scripts

  • Commands to install Statistics::R module in Ubuntu !

    ...tate information... Done The following additional packages will be installed: r-base r-base-html Suggested packages: ess r-doc-info | r-doc-pdf The following NEW packages w...

    1525 days ago

  • Basic docker commands !

    ...nloads/testDock$ sudo docker system df TYPE TOTAL...Deleted Images: deleted: sha256:a62df23989f7419cfb04d9fee7fee8c6dcf...nloads/testDock$ sudo docker system df TYPE TOTAL...s ---> Using cache ---> e79748ebdffd Step 9/12 : RUN cpanm inst...

    1523 days ago

  • Setting up autoConTAMPR !

    (base) jit@jit-HP-Pro-3335-MT:~/Downloads/testDock$ docker build -t autocontampr . Sending build context to Docker daemon 9.024MB Step 1/16 : FROM ubuntu:14.04 -...

    1456 days ago

  • Print the screenshot of read coverage remotely !

    #Chrom_2:9700000-9760000 ASCIIGenome -ni --fasta A_vaga.NDPD.fasta -r Chrom_2:9700000-9760000 -x "save >> test.pdf" A_vaga.NDPD.fasta.out.sam.bam.sorted.bam

    1297 days ago

  • Install grabseqs with conda !

    (JitMetaENV) ➜ JitMeta conda install grabseqs -c louiejtaylor -c bioconda -c conda-forge Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

    1230 days ago

  • Install prokka using conda !

    (JitMetaENV) ➜ assembly conda install -c bioconda prokka Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen...

    1229 days ago

  • Install wgd cli on linux !

    .... done Created wheel for bokeh: filename=bokeh-1.4.0-py3-none-any.whl size=23689200 sha256=5109a280afc85f01827c33d14f705cff39975bc24cd852a3c9efa0bdfb10e403 Stored in directory...

    1221 days ago

  • Install gffread using Conda !

    ...12597_0 635 KB bioconda libgcc-ng-9.1.0 | hdf63c60_0 5.1 MB libstdcxx-ng-9.1.0 | hdf63c60_0 3.1 MB zl...

    1217 days ago

  • Set up WGD environment using conda !

    ...y3-none-any.whl size=75291 sha256=56a7a19b3f4e535897038e8297166a640a7a6a7fdfeb89f5afde4aaa0208ae67 Stor...e=23689200 sha256=7daa115fd1b052d429abb6c7082cbbb96defc81716da99ce873760cedf0dbe6f Stored in directory:...

    1217 days ago

  • R script to visualize fastANI core-genome comparison

    ####### # Purpose: Visualize fastANI core-genome comparison # Usage: Rscript # Output: .pdf # Uses genoPlotR package: http://genoplotr.r-forge.r-project.org #Parse comma...

    1115 days ago