Installing Porechop on Ubuntu !
...t identity to a barcode to be binned (default: 75.0) --barcode_diff BARCODE_DIFF If the difference between a read's best barcode...2106 days ago
Tadpole is 250x faster than SPADes assembler !
...to kmers with count under this. pathsimilarityfraction=0.45(psf) Max difference ratio considered similar....appears to be continuous. pathsimilarityconstant=3 (psc) Absolute differences below this are ignored. err...976 days ago
Bash script to find difference between two files !
#lines which are exist only in file2: grep -Fxvf file1 file2 > file3 #lines which are exist only in file1: grep -Fxvf file2 file1 > file3 #lines which are exist in both files: grep -Fxf file1 file2 > file3772 days ago
Bash script to calculate difference between column !
Space Separated awk '{ $5 = $2 - $4 } 1' inputput.txt > outdiff.txt Or with tab separation: awk 'BEGIN { OFS = "\t" } { $5 = $2 - $4 } 1' inputput.txt > outdiff.txt94 days ago