Epiviz: an interactive visualization tool for functional genomics data.
Epiviz is an interactive visualization tool for functional genomics data. It supports gen...other user-supplied visualizations. It also includes data from the Gene Expression Barcode project for tran...2125 days ago
Heatmapper: web-enabled heat mapping for all
Heatmapper is a freely available web server that allows users to interactively visualize...tions. Heatmapper allows users to generate, cluster and visualize: 1) expression-based heat maps from tra...2041 days ago
BioGPS: Spotlight on the Gene Expression Atlas
BioGPS opened 2016 with a publication in Nucleic Acids Research, right after the New Year holiday. Throughout the year, new designs for the site were being created, revie...2023 days ago
KOBAS: a web server for gene/protein functional annotation and functional gene set enrichment
KOBAS 3.0 is a web server for gene/protein functional annotation (Annotate module) a...Gene Ontology. For Enrichment module, it can accept either gene list or gene expression data as input, and generates...2023 days ago
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GeneOverlap: An R package to test and visualize gene overlaps
Overlapping gene lists can reveal biological meanings and may...hromatin structure more dense or loose, the gene expression can be turned on or off. Tri-...erent histone modifications with that of various expression groups and establish each his...1953 days ago
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geck: trio-based comparative benchmarking of variant calls
Determine the accuracy of our model by comparing the precision and recall of GATK Unified Genotyper and Haplotype Calle...dent Platinum Genome trios. We show that our method is able to estimate differenti...1810 days ago
iSeqQC: a tool for expression-based quality control in RNA sequencing
iSeqQC, an expression-based QC tool that detects outliers either produced due to variable laboratory conditions or due to dissimilarity within a phenotypic group. iSeqQC imple...1538 days ago