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  • iSeqQC: a tool for expression-based quality control in RNA sequencing

iSeqQC: a tool for expression-based quality control in RNA sequencing

https://github.com/gkumar09/iSeqQC

iSeqQC, an expression-based QC tool that detects outliers either produced due to variable laboratory conditions or due to dissimilarity within a phenotypic group. iSeqQC implements various statistical approaches including unsupervised clustering, agglomerative hierarchical clustering and correlation coefficients to provide insight into outliers.

http://cancerwebpa.jefferson.edu/iSeqQC/

https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-020-3399-8