3962 days ago
Phylogenetic for Bioinformatics
...represented graphically through phylogenetic trees. Due to the fact that evolution takes place over long periods of time that cannot be observed directly, biologists must reconstruct...3961 days ago
Commercial and public next-gen-seq (NGS) software
...the Wold lab. G-Mo.R-Se - G-Mo.R-Se is a method aimed at using RNA-Seq short reads to build de novo gene models. First, candidate exons are built directly from the positions of the rea...3534 days ago
Software packages for next gen sequence analysis
...e Wold lab. * G-Mo.R-Se - G-Mo.R-Se is a method aimed at using RNA-Seq short reads to build de novo gene models. First, candidate exons are built directly from the positions of the rea...3257 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...com site: data downloads come directly from NCBI Ingenuity Vari...er formats consumes NCBI data directly Genomatix Application...ertain phenotype- “that directly tests the molecular mechanism...ed on the SCAN database comes directly from public resources, includ...2924 days ago
Worldwide funding agencies to fund your bioinformatics research !!
...unyon Cancer Research Foundation: Every cent donated to the DRCRF directly feeds into fellowships and aw...ly supports scientific studies investigating tinnitus. Studies must be directly concerned with tinnitus and c...2953 days ago
Genome Assembly Tools and Software - PART1 !!
...REPdenovo – A tool to Construct Repeats directly from Raw Reads REPdenovo is designed for constructing repeats directly from sequence reads. It based...mbler. It assembles the transposable elements directly from the raw reads. HyDA...2701 days ago
Source Code and Pseudo Code !!
...te this notion. GUIDE TO PSEUDOCODE LEVEL OF DETAIL: Given record/file descriptions, pseudocode should be created in sufficient detail so as to directly support the programming effor...2674 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...FastGT Genotyping of known SNV/SNP variants directly from raw NGS sequence reads b...phylogenomics AAF Phylogeny reconstruction directly from unassembled raw sequence.../lmat/ stringMLST k-mer-based tool for MLST directly from the genome sequencing re...2386 days ago
Tools for bacterial whole genome annotation
...automatically synthesizes these data into gene annotations having evidence-based quality values. MAKER's inputs are minimal and its ouputs can be directly loaded into a Generic Model O...2346 days ago