Results for "directly"
Bio-Scripts
...sample_links rule download_reads: output: "rnaseq/raw_data/{sample}.fq.gz" params: # dynamically generate the download link directly from the dictionary...1531 days ago
Bash script to download SRA file !
#We can use the sratoolkit to directly pull the sequence data (in paired FASTQ forma.... fastq-dump is in the SRA toolkit. It allows directly downloading data from a parti...articular compressed format (SRA!) that isn't directly compatible with any downstrea...1574 days ago
- #This method can be applied directly to FASTA or a FASTQ file, compressed or uncompressed files. Seqtk is a fast and lightweight tool for processing biological data (FASTA/FASTQ). if...
1417 days ago
Set up WGD environment using conda !
#Wgd cannot be installed directly with bioconda at present, so it is slightly troublesome to install, because it #depends on a lot of software. wgd depends on the following software...1218 days ago
- ...also use the -p option to specify where this environment should be stored. We will also make a symlink so the executable downloaded is available directly from our bin folder. To run G...
826 days ago
