Results for "dna"
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Well designed regular expression cheat sheet
In our computational biology work, we mostly play with DNA or AA string. For string based programming work this regular expression cheat sheet is really helpful. Keep it handy.3955 days ago
- ...ing where they are covering the common algorithms underlying the following fundamental topics in bioinformatics: assembling genomes, comparing DNA and protein sequences, predic...
3950 days ago
Nucl2Vec: Local alignment of DNA sequences using Distributed Vector Representation
We demonstrate a novel approach forlocal alignment of DNA reads with respect to reference genome.For this process we have used Skip-gram model for creatingencoding(Nucl2Vec) and k-n...1151 days ago
What Junk DNA? It’s an Operating System
The report adds to growing experimental support for the idea that all that extra stuff in the human genes, once referred to as “junk DNA,” is more than functionless, spa...3916 days ago
Next Generation Sequencing (NGS) Tutorials
...-inference.co.uk/blog/2009/04/basics-sequencing-dna-part-1/ http://www.genetic-inference.co.uk/blog/2009/08/basics-sequencing-dna-part-2/ A window into third-...discovery and genotyping using next-generation DNA sequencing data PubMed:...3492 days ago
Bioinformatics software for biologists in the genomics era
...ution is approaching a landmark figure of 1000 completely sequenced genomes. Coupled with fast-declining, per-base sequencing costs, this influx of DNA sequence data has encouraged...3791 days ago
Encode sequencing data freely available to download and use for academic means
In Encode, regulatory elements investigated via DNA hypersensitivity assays, assays of DNA methylation, and chromatin immunoprecipitation (ChIP) of proteins that interact with DNA, including modified histones...3710 days ago
- ...concepts of detecting small variants (SNVs and indels) in human genomic DNA using a small set of reads fr...scuss ChIP-Seq: a method to analyze the interaction between proteins and DNA. Amplicons Protocol Am...
3658 days ago
Managing and Analyzing Next-Generation Sequence Data
...o effectively react to new types of experimental technology. Recently faced with an unprecedented flood of data generated by the next generation of DNA sequencers, these groups foun...3643 days ago
Swabs to Genomes: A Comprehensive Workflow
...ial for research labs with access to standard molecular biology and computational tools. However, there are a wide variety of options available for DNA library preparation and seque...3561 days ago
