3495 days ago
Comprehensive list of visualization tools for biological pathways
....sourceforge.net/SourceForge/EPE.html GenMAPP Visualization of gene expression and other genomic data on map...r pathways ArrayXPath Mapping and visualizing microarray gene-expression data and integrated biologica...2286 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...ons Workflows for microarray and PCR data include: Gene expression including alternative splicing, miRNA expression, Genome Wide Association Stud...h genetic variation affects phenotype.”; no actual expression data used, only in silico exp...2908 days ago
Genome Assembly Tools and Software - PART1 !!
...lues in order to address variable transcript expression levels. It first filters and...splicing. Its scripts can also estimate gene expression levels, identify candidate po...rnatively spliced isoforms and estimates the expression level of them. VirAmp &n...2685 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...rence sequences and RNA-seq data (k-mer based) Software (C++) http://www.cs.cmu.edu/~ckingsf/software/sailfish/ Salmon Quantification of the expression of transcripts using RNA-seq...2370 days ago
Single Cell RNAseq data analysis tutorial !!
...ince Measures the average expression level for each gene acro...species Useful for quantifying expression signatures from ensembles, e....o the stochastic nature of gene expression Following are the useful l...ell Resolution of Temporal Gene Expression during Heart Development htt...2350 days ago
2350 days ago
PerlOneLiner for Bioinformatician
...-10..$#a]; END { print @a }' # Print only lines that match a regular expressionperl -ne '/regex/ && print' # Print only lines that do not match a regular expressionperl -ne '!/regex/ &&...2301 days ago
Webinar on RNA-Seq Data Analysis on 28 Feb 2018
...d visualization of RNA-Seq data. This webinar will give an overview of the workflow which includes Transcriptome/ Genome alignment, Differential expression analysis, Splicing events and...2263 days ago
Ancestral sequence reconstruction steps !
...sp;– is a technique used in the study of molecular evolution. The method consists of the synthesis of an ancestral gene and expression of the corresponding ancestra...2178 days ago