Results for "facilitates"
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Janggu - Deep learning for Genomics
Janggu is a python package that facilitates deep learning in the context of genomics. The package is freely available under a GPL-3.0 license. Detail tutorial at https://janggu.readthedocs.io/en/latest/ USE cases https://github.com/wkopp/janggu_usecases1154 days ago
Ensembl comparative genomics resources
The Ensembl comparative genomics resources are one such reference set that facilitates comprehensive and reproducible analysis of chordate genome data. Ensembl computes pairwise and m...3003 days ago
- FQC is software that facilitates quality control of FASTQ files by carrying out a QC protocol using FastQC, parsing results, and aggregating quality metrics into an interactive dash...
1287 days ago
ChromHMM: Chromatin state discovery and characterization
...te a genome in one or more cell types. By automatically computing state enrichments for large-scale functional and annotation datasets ChromHMM facilitates the biological characterizati...2588 days ago
npScarf: Scaffolding and Completing Assemblies in Real-time Fashion
...me with Oxford Nanopore sequencing. The pipeline can run on a computing cluster as well as on a laptop computer for microbial datasets. It also facilitates the real-time analysis of pos...2554 days ago
ARC: pipeline which facilitates iterative, reference guided de novo assemblies
ARC is a pipeline which facilitates iterative, reference guided de novo assemblies with the intent of: Reducing time in analysis and increasing accuracy of results by on...2125 days ago
mmgenome: Tools for extracting individual genomes from metagneomes
.... Thereby making the whole process of binning easy and at the same time reproducible through the Rmarkdown format. The mmgenome R package also facilitates effortless integration with a...2110 days ago
S-plot2: creates an interactive, two-dimensional heatmap of sequences
...ently compared. The tool includes functionality to extract, analyze, and automate BLAST queries of regions of interest within the heatmap. This facilitates the investigation of quickly...2061 days ago
S-plot2: Rapid Visual and Statistical Analysis of Genomic Sequences
...ently compared. The tool includes functionality to extract, analyze, and automate BLAST queries of regions of interest within the heatmap. This facilitates the investigation of quickly...2056 days ago
gEVAL: Genome Evaluation Browser
...lity to navigate an up to date assembly and identify problematic regions and assist in strategizing potential solutions for these issues. This facilitates the improvement of overall as...1798 days ago
