Results for "files"
Bio-Scripts
Perl subroutine for reading multifasta file !
sub readfasta { (my $file)=@_; my %sequence; my $header; my $temp_seq; #suppose fasta files contains multiple sequences; open (IN, "2144 days ago
- ...astq' ]; Right read files: $VAR1 = [ '/media...LEL_STATS Converting input files. (both directions in parallel...K25.stats.sort -done opening files. CMD finished (85 seconds)...ity_out_dir/partitioned_reads.files.list.ok Monday, July 9, 2018...
2127 days ago
- ...Filter by sequence length >= -R|--read-filter Split into files by READ_FILTER value...according to splitting criteria. --split-files Dump each...
2126 days ago
Install Parrot Virtual Machine !
...ure.pl line 84. Deleting gcov-generated files Deleting cover-generated html files init::manifest - Chec...one. auto::ops - Which opcode files should be compiled in...........Generate a list of platform object files...........done. auto::aligno...1537 days ago
Long reads mapper bash script !
...apLoc align -r $refFasta -d $longReads -t $thread -o $fileName.out.sam else echo "Unknown mapper name and parameter !" fi echo "Getting files ready for visualization !" $...2122 days ago
Installing Porechop on Ubuntu !
...which will be recursively searched for FASTQ files (required) -o OUTPUT, --ou...based on their barcode and saved to separate files in this directory...2105 days ago
- ...pipeline perfect echo " pipeline OK ______________________________________________________________________________ All looked OK so cleaning files... " #rm -fr out.* ech...
2098 days ago
- ...alTree Downloading https://files.pythonhosted.org/packages/aa/...-- Generating done -- Build files have been written to: /home/u...b/bamtools-2.3.0/src/api/CMakeFiles/BamTools-static.dir/SamProgra...Building CXX object src/CMakeFiles/sniffles.dir/Alignment.cpp.o...
2098 days ago
- ...ine the breakpoints of two segment files and annotate the resulting in...s multiple Variant Calling Metrics files into a single file Analy...Split intervals into sub-interval files. -------------------------...Sorts one or more VCF files. SplitVcfs (Picard)...
2075 days ago
- ...2 +- themes/xiong-chiamiov.zsh-theme | 2 +- tools/theme_chooser.sh | 2 +- 140 files changed, 1710 insertions(+),...
2074 days ago
