Results for "functional analysis"
Top-level pages
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
kallisto Transcript abundance quantification from RNA...hylogenetic trees using SNPs (based on k-mer analysis) Software (C) https://sourc.../mash Kraken Taxonomic assignment in metagenome analysis by exact k-mer search; L...2383 days ago
Single Cell RNAseq data analysis tutorial !!
A major breakthrough (replaced microarrays) in th...e useful links: Single Cell RNAseq data analysis Tutorial A step-by-step workflow for low-level analysis of single-cell RNA-seq data...on and evaluation in single-cell RNA-seq analysis https://github.com/zji90/TSC...2362 days ago
- ...of applications, but no single analysis pipeline can be used in all cas...he major steps in RNA-seq data analysis, including experimental desig...ression, alternative splicing, functional analysis, gene fusion detection and eQ...gene and transcript expression analysis of RNA-seq experiments with T...
2362 days ago
Tools for bacterial whole genome annotation
...ovides detailed annotation and pathway analysis. Takes several hours per genome...nome. Note however that the quality of functional information is not as good as...ral extra steps if you want to do functional profiling and pathway analysis of your genome(s)… whi...2343 days ago
List of visualization tools for network biology
Network analysis is any structured technique used to mathematical...Igraph Collection of network analysis tools with the emphasis on ef...Automatic reconstruction and analysis of biological networks and Pe...logical networks from diverse functional genomic data http://pixie....2300 days ago
List of visualization tools for genome alignments
Genome browsers are useful not only for sh...final results but also for improving analysis protocols, testing data quali...ng result drafts. Its integration in analysis pipelines allows the optimiza...ion tools, which could be useful for analysis and interpretation of re...2295 days ago
Linux Commands Cheat Sheet for Bioinformatics and Computational Biology Professionals
The purpose of this cheat sheet is to introduce biologist and bioinformatician to the frequently used tools for NGS analysis as well as giving experience...2292 days ago
Computational resources for TE discovery and TE detection
Transposable Elements (TEs) to genome structure and evolution as well as their impact on...nerated increasing interest in developing new methods for their computational analysis. Following are the list of...2286 days ago
Webinar on RNA-Seq Data Analysis on 28 Feb 2018
Strand NGS is a biologist friendly NGS analysis tool that allows biologists to...very intuitive workflow for the analysis and visualization of RNA-Seq...gnment, Differential expression analysis, Splicing events and gene fus...pports large scale RNA-Seq data analysis too. The tool also supports b...2276 days ago
Python learning resources for bioinformatics and computational biologist !
...s. Professionally, Python is great for backend web development, data analysis, artificial intelligence, and s...sp;- Mark Pilgrim (2.3) From Python to NumPy Full Stack Python Functional Programming in Python ...2267 days ago
