Results for "fuzzy"
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YASS :: genomic similarity search tool
...en tries to extend them to local alignments. This genomic search tool uses multiple transition constrained spaced seeds that enable to search more fuzzy repeats, as non-coding DNA/RN...2940 days ago
Enrichr: a comprehensive gene set enrichment analysis
...urrently contains 180 184 annotated gene sets from 102 gene set libraries. New features have been added to Enrichr including the ability to submit fuzzy sets, upload BED files, impro...2580 days ago
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Top-level pages
Edit distance application in bioinformatics !
...t::Brew is an implementation of the Brew edit distance, which is another algorithm based on edit weights. Text::Fuzzy provides a number of operations for partial or fuzzy matching of text based on edi...2356 days ago
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The Best Bioinformatics / Computational Biology Quotes
...space on genome drive:" Shut up mobile elements, or i'll flush you out. Never underestimate the internet bandwidth, u gotta incomplete. Applied fuzzy logic to understand God's log...3735 days ago
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wtdbg2: A fuzzy Bruijn graph approach to long noisy reads assembly
Wtdbg2 is a de novo sequence assembler for long noisy reads produced by PacBio or Oxford Nanopore Technologies (ONT). It assembles raw reads without error correction and then builds the consensus from intermediate assembly output. ./wtdbg2 -x rs -g 4.6m -t 16 -i reads.fa.gz -fo p...Tags: wtdbg2, fuzzy, Bruijn, graph, approach, long, noisy, reads, assembly
1932 days ago
Comments
Comment on "REAPR: a universal tool for genome assembly evaluation"
...lso break up contigs/scaffolds at spurious sites to form smaller (but hopefully correct) contigs. Reapr runs pretty slowly, sadly, Reapr is a bit fuzzy with contig names, but luckil...1352 days ago
Comment on "Bioinformatics Algorithm Demonstrations and Tutorials"
Using Fuzzy Logic to Solve Bioinformatics Tasks https://ortus.rtu.lv/science/lv/publications/8859/fulltext3804 days ago
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