Results for "generated"
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Comment on "Short-read assembly using Spades !"
SPAdes (St. Petersburg genome assembler) is a popular tool for short-read assembly. It can assemble reads generated from Illumina, IonTorrent, PacBio, and Oxford Na...467 days ago
Comment on "Sibelia: A comparative genomics tool"
.... Run "Circos" in "circos" directory For example of such diagrams (generated from "Helicobacter_pylori.fas...non-branching paths are collapsed into a single edge. Blue edges are generated from positive strand and red...1331 days ago
Comment on "Installing Bio::SCF perl module"
jit@jit-HP-Pro-3335-MT:~/Downloads$ sudo cpan -T install Bio::SCP[sudo] password for jit: Loading internal null logger. Install Log::Log4perl for logging messagesReading '/home/jit/.cpan/Metadata' Database was generated on Fri, 13 Mar 2020 03:55:17 GMTinstall is up to date (0.01).1488 days ago
Comment on "Setting up autoConTAMPR !"
...t/.cpan/sources/modules/02packages.details.txt.gz' Database was generated on Sun, 24 May 2020 12:41:03...stribution installedReading '/root/.cpan/Metadata' Database was generated on Sun, 24 May 2020 12:41:03...1488 days ago
Comment on "Genome in a Bottle (GIAB) Consortium"
Benchmark (or "High-confidence") variant calls and regions:We developed an integration pipeline to utilize sequencing data generated by multiple technologies to generate variant calls...1606 days ago
- ...ion. Reads can be either FASTA or FASTQ format, uncompressed, or compressed with gz, bz2 or xz. Reads are specified by the technology they were generated with, and any processing perf...
2145 days ago
- ...r-friendly stand alone tools for quality control of the sequence data generated using Illumina and Roche 454...interface. The input could be one or more BAM files. HTML reports are generated as output. RSeQC RSeQC&...
2183 days ago
- ...eads can be either FASTA or FASTQ format, uncompressed, or compressed with gz, bz2 or xz. Reads are specified by the technology they were generated with: -pacbio-raw...
2221 days ago
Comment on "GraphMap - A highly sensitive and accurate mapper for long, error-prone reads"
...th to the index of the reference sequence. If not specified, index is generated in the same folder as the ref...tension. For non-parsimonious mode, secondary index .gmidxsec is also generated. -d, --reads STR Path to the...2338 days ago
- Compressive Genomics is the solution deal with problem arisen due to sudden explosion of redundant data generated by current sequencing technology and other solution is 3rd and 4th gen...
3964 days ago
