1220 days ago
1211 days ago
gggenomes: A grammar of graphics for comparative genomics
gggenomes is a versatile graphics package for comparative genomics. It extends the popular R visualization packageggplot2 by adding dedicated plot functions for genes, syntenic regions, etc. and verbs to manipulate the plot to, for example, quickly zoom in into gene neighborhoods.1202 days ago
263 days ago
RNA-Seq differential expression work flow using DESeq2
One of the aim of RNAseq data analysis is the detection of differentially expressed genes. The package DESeq2 provides methods to test for differential expression analysis.999 days ago
Corona Virus Genome and Data Download !
Genes and its related metadata could be found on https://www.ncbi.nlm.nih.gov/datasets/coronavirus/genomes/887 days ago
GEnView: A phylogeny based comparative genomics software to analyze the genetic environment of genes
...sed comparative genomics software to analyze the genetic environment of genes. The user can select one or s...omes can be provided. User selected stretches (20kbp by default) of the genes genetic environment are extra...872 days ago
ChIPBase: open database for studying the transcription factor binding sites and motifs
...cription factor binding sites and motifs, and decoding the transcriptional regulatory networks of lncRNAs, miRNAs, other ncRNAs and protein-coding genes from ChIP-seq data. Our datab...871 days ago
Genomicus: genome browser that enables users to navigate in genomes in several dimensions
...;or newick) Number of extant species 200 Number of extant genes 4303993 Number of ancestral species 196 Number of ancestral genes 4624213 Number of ancestr...809 days ago
465 days ago