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Results for "genes"

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  • Jit

    The gene drive bubble: New realities http://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1006850 #Genes #Drive

    Tags: Genes, Drive

    2471 days ago

  • Rahul Nayak

    Understanding liftOver !

    LiftOver is a necesary step to bring all genetical analysis to the same reference build. LiftOver can have three use cases: (1) Convert genome position from one genome assembly to another genome assembly In most scenarios, we have known genome positions in NCBI build 36 (UCSC hg 18) and hope to...

    Tags: LiftOver, Unlifted, lifted, switch, Coordinates, Genes, Genomes

    2154 days ago

  • Shruti Paniwala

    Finding coding regions in DNA sequences http://genome.crg.es/courses/Lisbon04/exercises/day2/Perl_programming/index.html #Perl #Genes #Script

    Tags: Perl, Genes, Script

    2149 days ago

  • Shruti Paniwala

    Gene prediction tools http://genome.crg.es/courses/laCaixa05/Prediction/index.html #Genes #Predicts

    Tags: Genes, Predicts

    1957 days ago

  • Shruti Paniwala

    DeCoSTAR: Reconstructing the Ancestral Organization of Genes or Genomes Using Reconciled Phylogenies

    DeCoSTAR computes adjacency evolutionary scenarios using a scoring scheme based on a weighted sum of adjacency gains and breakages. Solutions, both optimal and near-optimal, are sampled according to the Boltzmann–Gibbs distribution centered around parsimonious solutions, and statistical sup...

    Tags: DeCoSTAR, Reconstruction, Ancestral, Organization, Genes, Genomes, Reconciled, Phylogenies

    1578 days ago

  • BioStar

    Useful Gene Ontology dataset at NCBI ftp://ftp.ncbi.nlm.nih.gov/gene/DATA/ #Data #NCBI #Genes

    Tags: Data, NCBI, Genes

    1355 days ago

  • Abhimanyu Singh

    KOALA: KEGG's internal annotation tool for K number assignment of KEGG GENES using SSEARCH computation

    KOALA (KEGG Orthology And Links Annotation) is KEGG's internal annotation tool for K number assignment of KEGG GENES using SSEARCH computation. BlastKOALA and GhostKOALA assign K numbers to the user's sequence data by BLAST and GHOSTX searches, respectively, against ...

    Tags: KOALA, KEGG, annotation, tool, assignment, KEGG, GENES, SSEARCH, computation, Bacteria, Blast

    1965 days ago

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