Results for "genome overlapping features"
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Genome STRiP (Genome STRucture In Populations) is a suite of tools for disco...riation using data from multiple individuals.Genome STRiP looks both across and within a set of sequenced genomes to...e results, but the method gains power across genomes...2809 days ago
- CrossMap is a program for convenient conversion of genome coordinates (or annotation files) between diff...ED, GFF/GTF, VCF. CrossMap is designed to liftover genome coor... a program for aligning sequences to reference genome....
2810 days ago
- Bambus 2.0, the second generation Bambus scaffolder available as an open source package. W...pecified by mate-pairs. Such sources of information include alignment to a reference genome (...
2830 days ago
- OrganellarGenomeDRAW is dedicated to convert genetic information stored in GenBank entries to graphical...for the creation of high-quality, detailed circular maps of organellar genomes like the plastid genome (...
2830 days ago
- KisSplice is a software that enables to analyse RNA-seq data with or without a reference genome. It is an exact local transcriptome assemble...oice of the post-treatment depends on the availability of a reference genome/t...
2830 days ago
- Recent technological progress has greatly facilitated de novo genome sequencing. However, de novo assembli...Visualization and quality assessment of de novo genome asse...Visualization and quality assessment of de novo genome a...
2822 days ago
- A probabilistic framework for structural variant discovery. Ryan M Layer, Colby Chiang, Aaron R...a M Hall. 2014. "LUMPY: a Probabilistic Framework for Structural Variant Discovery." Genome B...
2821 days ago
- In this exercise, a previously annotated gene will be used to measure the accuracy of diffe...ding approaches. GRAIL, GENSCAN, geneid, FGENESH, GenomeScan,...ong prediction of initial exons in most cases. http://genome.c...
2820 days ago
- gKaKs is a codon-based genome-level Ka/Ks computation pipeline developed and based on progr...tion rates (Ka, Ks and Ka/Ks) between a well-annotated genome and...d dataset. It is especially useful for newly sequenced genomes...
2816 days ago
Comparative genomics educational material and papers bookmarks
Alignment of the porcine genome against seven other mammalian genomes (Supplementary Information) identified homologous...actyl EBRs (shared by pigs and cattle) were detected using the pig and human genomes...2744 days ago
