Some useful Bioinformatics links
Reference-free prediction of rearrangement breakpoint reads | Bio...assembly of a complex animal genome | bioRxiv https://www.biorxi...assembly of the European eel genome from nanopore sequencing read...-scale scaffolding of de novo genome assemblies based on chromatin...2252 days ago
Tools to Predict the Impact of Missense Variants !
Prioritizing missense variants for further experimental investigation is a key challenge in curr...s of single‐nucleotide variants as well as insertion/deletions variants in the human genome&r...2213 days ago
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Gap filling or Contigs extensions tools !
There are many tools to perform gap filling using Illumina short r...ads" or "Toward almost closed genomes with GapFiller". There are a...ook at the IMAGE tool: http://genomebiology.com/2010/11/4/R41...rested in assembling the full genome, just the 100 kb part you're inter...2175 days ago
Learning Python Programming - a bioinformatician perspective !
...se. One of the most important features of python is its rich set of...larity due to its easy-to-use features which supports big data proce...other, existing tools It has features which make it easy to manipul...ly correct and supports newer features. I will post tutorial on dai...2193 days ago
Understanding BLASTn output format 6 !
BLASTn output format 6 BLASTn maps DNA against DNA, for example gene sequences against a reference genomeblastn -query genes.ffn -subject genome.fna ...id 2. sseqid subject (e.g., reference genome)...2149 days ago
List of non-commercial NGS genotype-calling software
Meaningful analysis of next-generation sequencing (NGS) data, which are produced extensivel...K http://www.broadinstitute.org/gsa/wiki/index.php/The_Genome_Anal...anger.ac.uk/resources/software/margarita) MaCH http://genome.s...2106 days ago
Bioinformatics in Africa:- Part 1
The Institut Pasteur de Côte d’Ivoire was created by the N°72511 law o...bsp;training in bioinformatics and genome ...2007 a yearly regional course of initiation and using genome d...1200 days ago
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Bioinformatics tools for genome assembly !
There are numerous genome assembly tools available, each with its st...e is a list of some widely used genome assembly tools as of my last...e-cell and multi-cell bacterial genomes, as well as small eukaryotic...or assembling large and complex genomes....able for small and medium-sized genomes....296 days ago